Package: mixdir 0.3.0

mixdir: Cluster High Dimensional Categorical Datasets

Scalable Bayesian clustering of categorical datasets. The package implements a hierarchical Dirichlet (Process) mixture of multinomial distributions. It is thus a probabilistic latent class model (LCM) and can be used to reduce the dimensionality of hierarchical data and cluster individuals into latent classes. It can automatically infer an appropriate number of latent classes or find k classes, as defined by the user. The model is based on a paper by Dunson and Xing (2009) <doi:10.1198/jasa.2009.tm08439>, but implements a scalable variational inference algorithm so that it is applicable to large datasets. It is described and tested in the accompanying paper by Ahlmann-Eltze and Yau (2018) <doi:10.1109/DSAA.2018.00068>.

Authors:Constantin Ahlmann-Eltze [aut, cre], Christopher Yau [ths]

mixdir_0.3.0.tar.gz
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mixdir_0.3.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
mixdir/json (API)

# Install 'mixdir' in R:
install.packages('mixdir', repos = c('https://const-ae.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/const-ae/mixdir/issues

Uses libs:
  • c++– GNU Standard C++ Library v3
Datasets:
  • mushroom - Properties of 8124 mushrooms.

On CRAN:

Conda:

categorical-dataclusteringquestionnairesvariational-inferencecpp

4.31 score 17 stars 24 scripts 303 downloads 1 mentions 5 exports 3 dependencies

Last updated from:f772069f13. Checks:15 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-arm64OK117
linux-devel-x86_64OK125
source / vignettesOK157
linux-release-arm64OK140
linux-release-x86_64OK121
macos-release-arm64OK126
macos-release-x86_64OK182
macos-oldrel-arm64OK99
macos-oldrel-x86_64OK242
windows-devel-arm64OK233
windows-devel-x86_64OK163
windows-release-arm64OK188
windows-release-x86_64OK105
windows-oldrel-x86_64OK92
wasm-releaseOK90

Exports:find_defining_featuresfind_predictive_featuresfind_typical_featuresmixdirplot_features

Dependencies:extraDistrRcppRcppArmadillo