Package: mixdir 0.3.0

mixdir: Cluster High Dimensional Categorical Datasets

Scalable Bayesian clustering of categorical datasets. The package implements a hierarchical Dirichlet (Process) mixture of multinomial distributions. It is thus a probabilistic latent class model (LCM) and can be used to reduce the dimensionality of hierarchical data and cluster individuals into latent classes. It can automatically infer an appropriate number of latent classes or find k classes, as defined by the user. The model is based on a paper by Dunson and Xing (2009) <doi:10.1198/jasa.2009.tm08439>, but implements a scalable variational inference algorithm so that it is applicable to large datasets. It is described and tested in the accompanying paper by Ahlmann-Eltze and Yau (2018) <doi:10.1109/DSAA.2018.00068>.

Authors:Constantin Ahlmann-Eltze [aut, cre], Christopher Yau [ths]

mixdir_0.3.0.tar.gz
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manual.pdf |manual.html
DESCRIPTION |NEWS
card.svg |card.png
mixdir/json (API)

# Install 'mixdir' in R:
install.packages('mixdir', repos = c('https://const-ae.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/const-ae/mixdir/issues

Uses libs:
  • c++– GNU Standard C++ Library v3
Datasets:
  • mushroom - Properties of 8124 mushrooms.

On CRAN:

Conda:

categorical-dataclusteringquestionnairesvariational-inferencecpp

4.27 score 17 stars 22 scripts 149 downloads 1 mentions 5 exports 3 dependencies

Last updated from:f772069f13. Checks:13 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-arm64OK126
linux-devel-x86_64OK147
source / vignettesOK161
linux-release-arm64OK139
linux-release-x86_64OK138
macos-release-arm64OK85
macos-release-x86_64OK270
macos-oldrel-arm64OK91
macos-oldrel-x86_64OK320
windows-develOK310
windows-releaseOK106
windows-oldrelOK97
wasm-releaseOK105

Exports:find_defining_featuresfind_predictive_featuresfind_typical_featuresmixdirplot_features

Dependencies:extraDistrRcppRcppArmadillo