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Proteomics Data Import3 months ago
Introduction | MaxQuant File Overview | Workflow | Base R | Tidyverse | Session Info
proDA 1.27.0Constantin Ahlmann-Eltzedata-import.Rmd
Pseudobulk and differential expression3 years ago
Pseudobulk | Example | Legacy
glmGamPoi 1.25.1Constantin Ahlmann-Eltzepseudobulk.Rmd
Introduction to 'ggsignif' package4 years ago
Statement of Need | How to use it? | Simple case | Advanced options | Bugs, Comments or Questions?
ggsignif 0.6.4.9000Constantin Ahlmann-Eltze and Indrajeet Patilintro.Rmd
transformGamPoi Quickstart5 years ago
Installation | Example | Delta method-based variance stabilizing transformations | Model residuals-based variance stabilizing transformations | Session Info
transformGamPoi 1.19.0Constantin Ahlmann-EltzetransformGamPoi.Rmd
glmGamPoi Quickstart6 years ago
Installation | Example | Benchmark | Scalability | Differential expression analysis | Session Info
glmGamPoi 1.25.1Constantin Ahlmann-EltzeglmGamPoi.Rmd
sparseMatrixStats6 years ago
Installation | Introduction | Alternative Matrix Creation | Benchmark | Session Info
sparseMatrixStats 1.25.0Constantin Ahlmann-EltzesparseMatrixStats.Rmd
Introduction7 years ago
proDA | Installation | Quickstart | proDA Walkthrough | Load Data | Quality Control | Fit the Probabilistic Dropout Model | Identify Differential Abundance | Session Info
proDA 1.27.0Constantin Ahlmann-EltzeIntroduction.Rmd